Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70151.1 | ABK73137.1 | MSMEG_4279 | MSMEG_4643 | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | 0.455 |
| ABK70509.1 | ABK71565.1 | MSMEG_3118 | MSMEG_4688 | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | 0.446 |
| ABK70509.1 | ABK73071.1 | MSMEG_3118 | MSMEG_3045 | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | Integral membrane protein. | 0.452 |
| ABK70509.1 | ABK73137.1 | MSMEG_3118 | MSMEG_4643 | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | 0.549 |
| ABK70509.1 | mca | MSMEG_3118 | MSMEG_5261 | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetyl-cysteinyl-glucosaminyl-inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics. Activity is specific for the mycothiol moiety. | 0.489 |
| ABK71565.1 | ABK70509.1 | MSMEG_4688 | MSMEG_3118 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | 0.446 |
| ABK71565.1 | ABK73137.1 | MSMEG_4688 | MSMEG_4643 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | 0.489 |
| ABK71565.1 | mca | MSMEG_4688 | MSMEG_5261 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetyl-cysteinyl-glucosaminyl-inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics. Activity is specific for the mycothiol moiety. | 0.794 |
| ABK72323.1 | ABK73137.1 | MSMEG_6935 | MSMEG_4643 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | 0.568 |
| ABK72323.1 | ponA1 | MSMEG_6935 | MSMEG_6900 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | 0.449 |
| ABK72323.1 | ripA | MSMEG_6935 | MSMEG_3145 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity). | 0.435 |
| ABK72469.1 | ABK73137.1 | MSMEG_4632 | MSMEG_4643 | Saccharopine dehydrogenase; Identified by match to protein family HMM PF03435. | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | 0.631 |
| ABK72925.1 | ABK73137.1 | MSMEG_0007 | MSMEG_4643 | Conserved hypothetical protein. | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | 0.466 |
| ABK72925.1 | ponA1 | MSMEG_0007 | MSMEG_6900 | Conserved hypothetical protein. | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | 0.411 |
| ABK73071.1 | ABK70509.1 | MSMEG_3045 | MSMEG_3118 | Integral membrane protein. | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | 0.452 |
| ABK73071.1 | ABK73137.1 | MSMEG_3045 | MSMEG_4643 | Integral membrane protein. | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | 0.440 |
| ABK73137.1 | ABK70151.1 | MSMEG_4643 | MSMEG_4279 | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | 0.455 |
| ABK73137.1 | ABK70509.1 | MSMEG_4643 | MSMEG_3118 | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025. | 0.549 |
| ABK73137.1 | ABK71565.1 | MSMEG_4643 | MSMEG_4688 | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | 0.489 |
| ABK73137.1 | ABK72323.1 | MSMEG_4643 | MSMEG_6935 | Resuscitation-promoting factor; Identified by match to protein family HMM PF06737. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | 0.568 |
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