STRINGSTRING
ABK70320.1 ABK70320.1 ABK74858.1 ABK74858.1 ABK74698.1 ABK74698.1 ABK74828.1 ABK74828.1 ABK72920.1 ABK72920.1 ABK73793.1 ABK73793.1 ABK72686.1 ABK72686.1 ABK73131.1 ABK73131.1 ABK74030.1 ABK74030.1 iolG iolG ABK70236.1 ABK70236.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70320.1phytanoyl-CoA dioxygenase; Identified by match to protein family HMM PF05721. (398 aa)    
Predicted Functional Partners:
ABK74858.1
DNA-binding protein.
 
    0.912
ABK74698.1
Putative oxidoreductase YisS; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
    0.911
ABK74828.1
Identified by match to protein family HMM PF01261.
 
    0.869
ABK72920.1
Identified by match to protein family HMM PF01261; Belongs to the hyi family.
 
    0.832
ABK73793.1
D-oliose 4-ketoreductase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
  
    0.799
ABK72686.1
IolD protein; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
 
  
 0.678
ABK73131.1
Conserved hypothetical protein.
  
    0.642
ABK74030.1
FAD binding domain protein; Identified by match to protein family HMM PF01565.
 
 0.637
iolG
Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
    0.575
ABK70236.1
acetyl-CoA acetyltransferase.
  
 
 0.574
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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