STRINGSTRING
lipP lipP ABK74219.1 ABK74219.1 ABK75057.1 ABK75057.1 ABK72429.1 ABK72429.1 ABK72981.1 ABK72981.1 ABK71957.1 ABK71957.1 ABK72623.1 ABK72623.1 ABK70511.1 ABK70511.1 ABK76049.1 ABK76049.1 ABK73811.1 ABK73811.1 ABK71611.1 ABK71611.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipPCarboxylesterase, putative; Identified by similarity to PIR:JC2091; match to protein family HMM PF00144. (401 aa)    
Predicted Functional Partners:
ABK74219.1
Esterase; Identified by match to protein family HMM PF07859.
  
  
 0.831
ABK75057.1
Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976.
  
  
 0.829
ABK72429.1
Conserved hypothetical protein.
     
 0.829
ABK72981.1
Identified by match to protein family HMM PF04909.
  
  
 0.825
ABK71957.1
Identified by match to protein family HMM PF04909.
     
 0.823
ABK72623.1
Conserved hypothetical protein.
       0.624
ABK70511.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.536
ABK76049.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.535
ABK73811.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
  
    0.472
ABK71611.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
  
    0.432
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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