Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70223.1 | ABK74084.1 | MSMEG_1757 | MSMEG_4259 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573. | 0.606 |
| ABK70223.1 | ABK74586.1 | MSMEG_1757 | MSMEG_1756 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Endonuclease VIII and dna n-glycosylase with an ap lyase activity; Identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; Belongs to the FPG family. | 0.986 |
| ABK70223.1 | ABK75773.1 | MSMEG_1757 | MSMEG_4683 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Putative formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 0.726 |
| ABK71161.1 | ABK71565.1 | MSMEG_4684 | MSMEG_4688 | Ribose 5-phosphate isomerase; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | 0.554 |
| ABK71161.1 | ABK73593.1 | MSMEG_4684 | MSMEG_4682 | Ribose 5-phosphate isomerase; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133. | Na+/H+ antiporter; Identified by match to protein family HMM PF00999. | 0.641 |
| ABK71161.1 | ABK75773.1 | MSMEG_4684 | MSMEG_4683 | Ribose 5-phosphate isomerase; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133. | Putative formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 0.881 |
| ABK71565.1 | ABK71161.1 | MSMEG_4688 | MSMEG_4684 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Ribose 5-phosphate isomerase; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133. | 0.554 |
| ABK71565.1 | ABK75773.1 | MSMEG_4688 | MSMEG_4683 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Putative formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 0.638 |
| ABK72031.1 | ABK74084.1 | MSMEG_3883 | MSMEG_4259 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573. | 0.590 |
| ABK72031.1 | ABK74586.1 | MSMEG_3883 | MSMEG_1756 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | Endonuclease VIII and dna n-glycosylase with an ap lyase activity; Identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; Belongs to the FPG family. | 0.561 |
| ABK72031.1 | ABK75773.1 | MSMEG_3883 | MSMEG_4683 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | Putative formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 0.561 |
| ABK72031.1 | nth | MSMEG_3883 | MSMEG_6187 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.422 |
| ABK72031.1 | polA | MSMEG_3883 | MSMEG_3839 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.787 |
| ABK73593.1 | ABK71161.1 | MSMEG_4682 | MSMEG_4684 | Na+/H+ antiporter; Identified by match to protein family HMM PF00999. | Ribose 5-phosphate isomerase; Identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133. | 0.641 |
| ABK73593.1 | ABK75773.1 | MSMEG_4682 | MSMEG_4683 | Na+/H+ antiporter; Identified by match to protein family HMM PF00999. | Putative formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 0.667 |
| ABK74084.1 | ABK70223.1 | MSMEG_4259 | MSMEG_1757 | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.606 |
| ABK74084.1 | ABK72031.1 | MSMEG_4259 | MSMEG_3883 | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573. | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | 0.590 |
| ABK74084.1 | ABK74586.1 | MSMEG_4259 | MSMEG_1756 | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573. | Endonuclease VIII and dna n-glycosylase with an ap lyase activity; Identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; Belongs to the FPG family. | 0.777 |
| ABK74084.1 | ABK75773.1 | MSMEG_4259 | MSMEG_4683 | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573. | Putative formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 0.580 |
| ABK74084.1 | mutY | MSMEG_4259 | MSMEG_6083 | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573. | Base excision DNA repair protein, HhH-GPD family protein; Adenine glycosylase active on G:A and C:A mispairs, as well as processing 7,8-dihydro-8-oxoguanine:A (8-oxoG) mismatches. Belongs to the Nth/MutY family. | 0.408 |
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