STRINGSTRING
ABK75097.1 ABK75097.1 ABK71938.1 ABK71938.1 ABK71529.1 ABK71529.1 ABK73786.1 ABK73786.1 ABK69571.1 ABK69571.1 ABK71132.1 ABK71132.1 ABK70735.1 ABK70735.1 ethR ethR ABK69655.1 ABK69655.1 ABK75039.1 ABK75039.1 ABK75904.1 ABK75904.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75097.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (201 aa)    
Predicted Functional Partners:
ABK71938.1
HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.841
ABK71529.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
  
 0.708
ABK73786.1
MoaC domain protein; Identified by match to protein family HMM PF01575.
 
  
 0.703
ABK69571.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
 
  
 0.700
ABK71132.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786.
  
 
 0.680
ABK70735.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.677
ethR
Transcriptional regulator, TetR family protein; Involved in the repression of teh monooxygenase EthA which is responsible of the formation of the active metabolite of ethionamide (ETH).
  
  
0.645
ABK69655.1
Identified by match to protein family HMM PF00440.
  
  
 0.614
ABK75039.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
   
  
 0.609
ABK75904.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
   
    0.599
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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