STRINGSTRING
ABK72237.1 ABK72237.1 murA murA ABK73630.1 ABK73630.1 ABK71324.1 ABK71324.1 ABK72512.1 ABK72512.1 ABK72411.1 ABK72411.1 ABK73338.1 ABK73338.1 ABK74406.1 ABK74406.1 ABK73130.1 ABK73130.1 ABK73986.1 ABK73986.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72237.1Conserved hypothetical protein. (338 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
 0.776
ABK73630.1
Transporter, major facilitator family protein, putative; Identified by match to protein family HMM PF00582; match to protein family HMM PF07690.
  
     0.689
ABK71324.1
Conserved hypothetical protein.
 
   
0.640
ABK72512.1
Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00486; match to protein family HMM PF03704.
 
     0.628
ABK72411.1
Conserved hypothetical protein.
  
  
 0.546
ABK73338.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.460
ABK74406.1
acyl-CoA dehydrogenase, short-chain specific, putative; Identified by match to protein family HMM PF08028.
  
    0.456
ABK73130.1
Putative membrane protein.
  
    0.455
ABK73986.1
Glycosyltransferase, group I; Identified by match to protein family HMM PF00534.
 
  
 0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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