STRINGSTRING
ABK74389.1 ABK74389.1 ABK71770.1 ABK71770.1 ABK70736.1 ABK70736.1 ABK70825.1 ABK70825.1 ABK72295.1 ABK72295.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74389.1Hypothetical protein; Identified by Glimmer2; putative. (47 aa)    
Predicted Functional Partners:
ABK71770.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.778
ABK70736.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.542
ABK70825.1
Ornithine carbamoyltransferase.
  
    0.450
ABK72295.1
Identified by match to protein family HMM PF03734.
  
    0.411
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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