STRINGSTRING
ABK69690.1 ABK69690.1 ABK74299.1 ABK74299.1 ABK74620.1 ABK74620.1 rseA rseA ABK72696.1 ABK72696.1 ABK73545.1 ABK73545.1 ABK73349.1 ABK73349.1 ABK69890.1 ABK69890.1 ABK74693.1 ABK74693.1 ABK73146.1 ABK73146.1 ABK75960.1 ABK75960.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69690.1Conserved hypothetical protein. (75 aa)    
Predicted Functional Partners:
ABK74299.1
Identified by match to protein family HMM PF00578.
  
    0.793
ABK74620.1
Conserved hypothetical protein.
  
    0.778
rseA
Conserved hypothetical protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily.
  
    0.776
ABK72696.1
Conserved hypothetical protein.
  
    0.774
ABK73545.1
Conserved hypothetical protein.
  
    0.773
ABK73349.1
Conserved hypothetical protein.
  
    0.765
ABK69890.1
Conserved hypothetical protein.
  
    0.764
ABK74693.1
Conserved hypothetical protein.
 
    0.763
ABK73146.1
Putative secreted alanine rich protein.
  
    0.762
ABK75960.1
Conserved hypothetical protein.
  
    0.761
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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