STRINGSTRING
ABK70530.1 ABK70530.1 ABK72685.1 ABK72685.1 ABK72967.1 ABK72967.1 ABK76047.1 ABK76047.1 ABK71854.1 ABK71854.1 ABK69833.1 ABK69833.1 ABK73948.1 ABK73948.1 ABK74488.1 ABK74488.1 ABK70745.1 ABK70745.1 saeC saeC ABK73798.1 ABK73798.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70530.1Conserved hypothetical protein. (200 aa)    
Predicted Functional Partners:
ABK72685.1
Conserved hypothetical protein.
 
    0.947
ABK72967.1
Conserved hypothetical protein.
 
     0.777
ABK76047.1
Conserved hypothetical protein.
  
 
 
 0.774
ABK71854.1
Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
  
 0.742
ABK69833.1
Conserved hypothetical protein.
 
 0.738
ABK73948.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.727
ABK74488.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.726
ABK70745.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.726
saeC
Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain.
  
 0.720
ABK73798.1
Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
  
 0.711
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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