STRINGSTRING
ABK72704.1 ABK72704.1 ABK74316.1 ABK74316.1 ABK71349.1 ABK71349.1 ABK74782.1 ABK74782.1 ABK70468.1 ABK70468.1 ABK71957.1 ABK71957.1 ABK70316.1 ABK70316.1 ABK71781.1 ABK71781.1 ABK72974.1 ABK72974.1 ABK73608.1 ABK73608.1 ABK73750.1 ABK73750.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72704.1Identified by match to protein family HMM PF04909. (350 aa)    
Predicted Functional Partners:
ABK74316.1
Conserved hypothetical protein.
 
  
 0.954
ABK71349.1
Rieske [2Fe-2S] domain, putative; Identified by match to protein family HMM PF00355.
 
    0.949
ABK74782.1
Identified by match to protein family HMM PF04909.
  
    0.758
ABK70468.1
Identified by match to protein family HMM PF04909.
  
    0.749
ABK71957.1
Identified by match to protein family HMM PF04909.
  
    0.749
ABK70316.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
 
    0.736
ABK71781.1
Identified by match to protein family HMM PF04909.
  
    0.732
ABK72974.1
Conserved hypothetical protein.
  
    0.721
ABK73608.1
Probable regulatory protein; Identified by match to protein family HMM PF00440.
 
     0.716
ABK73750.1
Identified by match to protein family HMM PF04909.
 
   
0.716
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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