STRINGSTRING
ABK73750.1 ABK73750.1 ABK74316.1 ABK74316.1 ABK71349.1 ABK71349.1 ABK72974.1 ABK72974.1 ABK70316.1 ABK70316.1 ABK73608.1 ABK73608.1 ABK73531.1 ABK73531.1 ABK72704.1 ABK72704.1 ABK75460.1 ABK75460.1 ABK74049.1 ABK74049.1 ABK75556.1 ABK75556.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73750.1Identified by match to protein family HMM PF04909. (364 aa)    
Predicted Functional Partners:
ABK74316.1
Conserved hypothetical protein.
 
  
 0.954
ABK71349.1
Rieske [2Fe-2S] domain, putative; Identified by match to protein family HMM PF00355.
 
    0.951
ABK72974.1
Conserved hypothetical protein.
  
    0.751
ABK70316.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
  
    0.750
ABK73608.1
Probable regulatory protein; Identified by match to protein family HMM PF00440.
 
    0.739
ABK73531.1
Conserved hypothetical protein.
 
    0.731
ABK72704.1
Identified by match to protein family HMM PF04909.
 
   
0.716
ABK75460.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.698
ABK74049.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.697
ABK75556.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
     0.684
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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