STRINGSTRING
ABK71114.1 ABK71114.1 ABK72743.1 ABK72743.1 ABK69571.1 ABK69571.1 ABK75990.1 ABK75990.1 etfA etfA ABK70216.1 ABK70216.1 ABK72254.1 ABK72254.1 ABK71556.1 ABK71556.1 ABK73414.1 ABK73414.1 ABK70906.1 ABK70906.1 ABK70451.1 ABK70451.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71114.1acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. (382 aa)    
Predicted Functional Partners:
ABK72743.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.950
ABK69571.1
Carboxyl transferase domain protein; Identified by match to protein family HMM PF01039.
  
 
 0.925
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.891
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012.
 
 0.865
ABK70216.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.853
ABK72254.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
 0.853
ABK71556.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
 0.853
ABK73414.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
 0.852
ABK70906.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
 0.852
ABK70451.1
delta3,5-delta2,4-dienoyl-CoA isomerase; Identified by match to protein family HMM PF00378.
  
 0.852
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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