STRINGSTRING
ABK72743.1 ABK72743.1 ABK75990.1 ABK75990.1 ABK71114.1 ABK71114.1 ABK74019.1 ABK74019.1 ABK73117.1 ABK73117.1 ABK75718.1 ABK75718.1 ABK69754.1 ABK69754.1 ABK75534.1 ABK75534.1 ABK75426.1 ABK75426.1 ABK74100.1 ABK74100.1 ABK72823.1 ABK72823.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ABK72743.1Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. (382 aa)    
Predicted Functional Partners:
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
 
 0.992
ABK71114.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 0.950
ABK74019.1
FadE12_1; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 0.948
ABK73117.1
glutaryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 0.943
ABK75718.1
glutaryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 0.943
ABK69754.1
glutaryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
 0.942
ABK75534.1
acyl-CoA oxidase; Identified by match to protein family HMM PF00441; match to protein family HMM PF01756; match to protein family HMM PF02770.
  
 0.942
ABK75426.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
  
 0.935
ABK74100.1
propionyl-CoA carboxylase beta chain; Identified by match to protein family HMM PF01039.
  
 0.934
ABK72823.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02785; match to protein family HMM PF02786.
  
 0.931
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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