STRINGSTRING
ABK72161.1 ABK72161.1 ABK74694.1 ABK74694.1 ABK71564.1 ABK71564.1 ABK72320.1 ABK72320.1 ABK70764.1 ABK70764.1 ABK72042.1 ABK72042.1 ABK74376.1 ABK74376.1 ABK75693.1 ABK75693.1 ABK72049.1 ABK72049.1 ABK76020.1 ABK76020.1 ABK75986.1 ABK75986.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72161.1Conserved domain protein. (64 aa)    
Predicted Functional Partners:
ABK74694.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.944
ABK71564.1
Identified by match to protein family HMM PF04909.
 
    0.866
ABK72320.1
Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
 
  
 0.847
ABK70764.1
Identified by match to protein family HMM PF00557.
 
  
 0.832
ABK72042.1
Identified by match to protein family HMM PF00557.
  
  
 0.809
ABK74376.1
enoyl-CoA hydratase, putative; Identified by match to protein family HMM PF00378.
  
    0.800
ABK75693.1
Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
  
    0.772
ABK72049.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106.
  
    0.736
ABK76020.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
  
    0.645
ABK75986.1
Hydrolase, alpha/beta fold family protein, putative; Identified by match to protein family HMM PF00561.
 
    0.643
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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