STRINGSTRING
ABK72350.1 ABK72350.1 ABK71062.1 ABK71062.1 ABK76006.1 ABK76006.1 ABK76209.1 ABK76209.1 ABK71803.1 ABK71803.1 ABK73922.1 ABK73922.1 ABK71069.1 ABK71069.1 ABK70548.1 ABK70548.1 ABK70103.1 ABK70103.1 ABK73891.1 ABK73891.1 ABK72896.1 ABK72896.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK72350.1Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. (359 aa)    
Predicted Functional Partners:
ABK71062.1
methylmalonyl-CoA mutase C-terminal domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640.
  
  
 0.901
ABK76006.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
    0.804
ABK76209.1
methylmalonyl-CoA mutase, N-terminus of large subunit; Identified by match to protein family HMM PF01642; match to protein family HMM TIGR00641.
  
  
 0.796
ABK71803.1
Putative monooxygenase.
   
 
 0.654
ABK73922.1
Oxygenase.
   
 
 0.653
ABK71069.1
Oxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
   
 
 0.651
ABK70548.1
Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
  
    0.544
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.500
ABK73891.1
acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF00441.
 
 
 0.448
ABK72896.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
  
   0.429
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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