STRINGSTRING
ABK72896.1 ABK72896.1 ABK69627.1 ABK69627.1 ABK73396.1 ABK73396.1 ABK70653.1 ABK70653.1 ABK70103.1 ABK70103.1 ABK72357.1 ABK72357.1 ABK74517.1 ABK74517.1 ABK73231.1 ABK73231.1 ABK70181.1 ABK70181.1 ABK71130.1 ABK71130.1 ABK75332.1 ABK75332.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72896.1Short chain dehydrogenase; Identified by match to protein family HMM PF00106. (286 aa)    
Predicted Functional Partners:
ABK69627.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
  
 
 
0.907
ABK73396.1
Peroxisomal trans-2-enoyl-CoA reductase; Identified by match to protein family HMM PF00106.
  
 
 
0.907
ABK70653.1
AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501.
  
 
 0.822
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.742
ABK72357.1
Conserved hypothetical protein.
  
    0.737
ABK74517.1
Major facilitator family protein transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
  
 0.710
ABK73231.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
  0.575
ABK70181.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
  
  0.575
ABK71130.1
butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
  0.574
ABK75332.1
butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
  0.573
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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