ABK72397.1 protein (Mycolicibacterium smegmatis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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Experiments

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[Homology]

Score

ABK72397.1

Conserved hypothetical protein. (124 aa)

Predicted Functional Partners:

ABK72558.1

0.910

ABK69890.1

0.769

ABK73545.1

0.761

ABK75644.1

0.760

ABK73349.1

0.754

ABK71106.1

0.752

ABK75235.1

0.752

ABK74248.1

0.748

ABK72696.1

0.745

ABK73961.1

0.737

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69890.1	ABK71106.1	MSMEG_4628	MSMEG_2695	Conserved hypothetical protein.	35 kDa protein; Identified by match to protein family HMM PF04012.	0.771
ABK69890.1	ABK72397.1	MSMEG_4628	MSMEG_4898	Conserved hypothetical protein.	Conserved hypothetical protein.	0.769
ABK69890.1	ABK72696.1	MSMEG_4628	MSMEG_1684	Conserved hypothetical protein.	Conserved hypothetical protein.	0.773
ABK69890.1	ABK73349.1	MSMEG_4628	MSMEG_4692	Conserved hypothetical protein.	Conserved hypothetical protein.	0.760
ABK69890.1	ABK73545.1	MSMEG_4628	MSMEG_5083	Conserved hypothetical protein.	Conserved hypothetical protein.	0.773
ABK69890.1	ABK73961.1	MSMEG_4628	MSMEG_1938	Conserved hypothetical protein.	Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569.	0.768
ABK69890.1	ABK74248.1	MSMEG_4628	MSMEG_4245	Conserved hypothetical protein.	Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.	0.771
ABK69890.1	ABK75235.1	MSMEG_4628	MSMEG_3804	Conserved hypothetical protein.	Conserved hypothetical protein.	0.770
ABK69890.1	ABK75644.1	MSMEG_4628	MSMEG_6434	Conserved hypothetical protein.	Conserved hypothetical protein.	0.737
ABK71106.1	ABK69890.1	MSMEG_2695	MSMEG_4628	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein.	0.771
ABK71106.1	ABK72397.1	MSMEG_2695	MSMEG_4898	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein.	0.752
ABK71106.1	ABK72696.1	MSMEG_2695	MSMEG_1684	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein.	0.760
ABK71106.1	ABK73349.1	MSMEG_2695	MSMEG_4692	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein.	0.840
ABK71106.1	ABK73545.1	MSMEG_2695	MSMEG_5083	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein.	0.769
ABK71106.1	ABK73961.1	MSMEG_2695	MSMEG_1938	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569.	0.699
ABK71106.1	ABK74248.1	MSMEG_2695	MSMEG_4245	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.	0.776
ABK71106.1	ABK75644.1	MSMEG_2695	MSMEG_6434	35 kDa protein; Identified by match to protein family HMM PF04012.	Conserved hypothetical protein.	0.490
ABK72397.1	ABK69890.1	MSMEG_4898	MSMEG_4628	Conserved hypothetical protein.	Conserved hypothetical protein.	0.769
ABK72397.1	ABK71106.1	MSMEG_4898	MSMEG_2695	Conserved hypothetical protein.	35 kDa protein; Identified by match to protein family HMM PF04012.	0.752
ABK72397.1	ABK72558.1	MSMEG_4898	MSMEG_4900	Conserved hypothetical protein.	Pks14 protein.	0.910