Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69723.1 | prfA | MSMEG_4948 | MSMEG_4950 | Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.852 |
| ABK69723.1 | prmC | MSMEG_4948 | MSMEG_4949 | Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family. | Modification methylase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.977 |
| ABK69723.1 | rpmE | MSMEG_4948 | MSMEG_4951 | Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family. | Ribosomal protein L31; Binds the 23S rRNA. | 0.623 |
| ABK69723.1 | wecA | MSMEG_4948 | MSMEG_4947 | Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family. | Glycosyl trasferase; Involved in the biosynthesis of the disaccharide D-N- acetylglucosamine-L-rhamnose which plays an important role in the mycobacterial cell wall as a linker connecting arabinogalactan and peptidoglycan via a phosphodiester linkage. Catalyzes the transfer of the N-acetylglucosamine-1-phosphate (GlcNAc-1P) moiety from UDP-GlcNAc onto the carrier lipid decaprenyl phosphate (C50-P), yielding GlcNAc- pyrophosphoryl-decaprenyl (GlcNAc-PP-C50). | 0.901 |
| ABK69999.1 | prmC | MSMEG_1130 | MSMEG_4949 | Hypothetical protein; Identified by Glimmer2; putative. | Modification methylase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.734 |
| ABK71679.1 | ABK71692.1 | MSMEG_5773 | MSMEG_6366 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.729 |
| ABK71679.1 | ispG | MSMEG_5773 | MSMEG_2580 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.488 |
| ABK71679.1 | prfA | MSMEG_5773 | MSMEG_4950 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.610 |
| ABK71679.1 | prmC | MSMEG_5773 | MSMEG_4949 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | Modification methylase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.791 |
| ABK71679.1 | rpmE | MSMEG_5773 | MSMEG_4951 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | Ribosomal protein L31; Binds the 23S rRNA. | 0.424 |
| ABK71679.1 | ychF | MSMEG_5773 | MSMEG_5222 | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.598 |
| ABK71692.1 | ABK71679.1 | MSMEG_6366 | MSMEG_5773 | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | 0.729 |
| ABK71692.1 | ispG | MSMEG_6366 | MSMEG_2580 | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.521 |
| ABK71692.1 | prfA | MSMEG_6366 | MSMEG_4950 | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.642 |
| ABK71692.1 | prmC | MSMEG_6366 | MSMEG_4949 | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | Modification methylase, HemK family protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.824 |
| ABK71692.1 | rpmE | MSMEG_6366 | MSMEG_4951 | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | Ribosomal protein L31; Binds the 23S rRNA. | 0.424 |
| ABK71692.1 | wecA | MSMEG_6366 | MSMEG_4947 | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | Glycosyl trasferase; Involved in the biosynthesis of the disaccharide D-N- acetylglucosamine-L-rhamnose which plays an important role in the mycobacterial cell wall as a linker connecting arabinogalactan and peptidoglycan via a phosphodiester linkage. Catalyzes the transfer of the N-acetylglucosamine-1-phosphate (GlcNAc-1P) moiety from UDP-GlcNAc onto the carrier lipid decaprenyl phosphate (C50-P), yielding GlcNAc- pyrophosphoryl-decaprenyl (GlcNAc-PP-C50). | 0.575 |
| ABK71692.1 | ychF | MSMEG_6366 | MSMEG_5222 | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.764 |
| ispG | ABK71679.1 | MSMEG_2580 | MSMEG_5773 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | Fatty acid desaturase; Identified by match to protein family HMM PF03405. | 0.488 |
| ispG | ABK71692.1 | MSMEG_2580 | MSMEG_6366 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | O-antigen export system, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.521 |
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