Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69580.1 | ABK74589.1 | MSMEG_4965 | MSMEG_4964 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.525 |
ABK69580.1 | ABK75543.1 | MSMEG_4965 | MSMEG_4962 | Hypothetical protein; Identified by Glimmer2; putative. | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.527 |
ABK70024.1 | ABK75543.1 | MSMEG_0147 | MSMEG_4962 | C-5 sterol desaturase. | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.517 |
ABK70024.1 | ABK76062.1 | MSMEG_0147 | MSMEG_4009 | C-5 sterol desaturase. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.416 |
ABK71145.1 | ABK75543.1 | MSMEG_3529 | MSMEG_4962 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.520 |
ABK71145.1 | ABK76062.1 | MSMEG_3529 | MSMEG_4009 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.413 |
ABK72776.1 | ABK75543.1 | MSMEG_1907 | MSMEG_4962 | Toluate 1,2-dioxygenase beta subunit; Identified by match to protein family HMM PF00866. | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.726 |
ABK72784.1 | ABK75543.1 | MSMEG_3666 | MSMEG_4962 | C-5 sterol desaturase. | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.508 |
ABK72784.1 | ABK76062.1 | MSMEG_3666 | MSMEG_4009 | C-5 sterol desaturase. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.401 |
ABK73356.1 | ABK75543.1 | MSMEG_2812 | MSMEG_4962 | C-5 sterol desaturase. | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.517 |
ABK73356.1 | ABK76062.1 | MSMEG_2812 | MSMEG_4009 | C-5 sterol desaturase. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.413 |
ABK74589.1 | ABK69580.1 | MSMEG_4964 | MSMEG_4965 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Hypothetical protein; Identified by Glimmer2; putative. | 0.525 |
ABK74589.1 | ABK75543.1 | MSMEG_4964 | MSMEG_4962 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.787 |
ABK75543.1 | ABK69580.1 | MSMEG_4962 | MSMEG_4965 | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Hypothetical protein; Identified by Glimmer2; putative. | 0.527 |
ABK75543.1 | ABK70024.1 | MSMEG_4962 | MSMEG_0147 | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.517 |
ABK75543.1 | ABK71145.1 | MSMEG_4962 | MSMEG_3529 | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | 0.520 |
ABK75543.1 | ABK72776.1 | MSMEG_4962 | MSMEG_1907 | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Toluate 1,2-dioxygenase beta subunit; Identified by match to protein family HMM PF00866. | 0.726 |
ABK75543.1 | ABK72784.1 | MSMEG_4962 | MSMEG_3666 | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.508 |
ABK75543.1 | ABK73356.1 | MSMEG_4962 | MSMEG_2812 | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.517 |
ABK75543.1 | ABK74589.1 | MSMEG_4962 | MSMEG_4964 | RemO protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.787 |
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