STRINGSTRING
ABK72062.1 ABK72062.1 ABK71935.1 ABK71935.1 ABK75450.1 ABK75450.1 ABK72828.1 ABK72828.1 ABK69613.1 ABK69613.1 ABK71973.1 ABK71973.1 ABK71322.1 ABK71322.1 ABK75607.1 ABK75607.1 ABK69580.1 ABK69580.1 ABK73168.1 ABK73168.1 ABK76006.1 ABK76006.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72062.1Conserved hypothetical protein; Identified by match to protein family HMM PF00296. (293 aa)    
Predicted Functional Partners:
ABK71935.1
CalU12 protein; Identified by match to protein family HMM PF05988.
  
    0.778
ABK75450.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
    0.751
ABK72828.1
Conserved hypothetical protein.
  
    0.729
ABK69613.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
    0.724
ABK71973.1
Luciferase; Identified by match to protein family HMM PF00296.
  
    0.658
ABK71322.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
    0.638
ABK75607.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
    0.637
ABK69580.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.637
ABK73168.1
Dehydrogenase; Identified by match to protein family HMM PF00296.
  
    0.620
ABK76006.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
     0.607
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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