Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69580.1 | ABK71935.1 | MSMEG_4965 | MSMEG_4966 | Hypothetical protein; Identified by Glimmer2; putative. | CalU12 protein; Identified by match to protein family HMM PF05988. | 0.630 |
ABK69580.1 | ABK72062.1 | MSMEG_4965 | MSMEG_4967 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.637 |
ABK69613.1 | ABK72062.1 | MSMEG_3301 | MSMEG_4967 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.724 |
ABK69613.1 | ABK76006.1 | MSMEG_3301 | MSMEG_4879 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.645 |
ABK71322.1 | ABK71973.1 | MSMEG_3977 | MSMEG_5626 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Luciferase; Identified by match to protein family HMM PF00296. | 0.430 |
ABK71322.1 | ABK72062.1 | MSMEG_3977 | MSMEG_4967 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.638 |
ABK71322.1 | ABK75607.1 | MSMEG_3977 | MSMEG_3544 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.698 |
ABK71322.1 | ABK76006.1 | MSMEG_3977 | MSMEG_4879 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.735 |
ABK71935.1 | ABK69580.1 | MSMEG_4966 | MSMEG_4965 | CalU12 protein; Identified by match to protein family HMM PF05988. | Hypothetical protein; Identified by Glimmer2; putative. | 0.630 |
ABK71935.1 | ABK72062.1 | MSMEG_4966 | MSMEG_4967 | CalU12 protein; Identified by match to protein family HMM PF05988. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.778 |
ABK71973.1 | ABK71322.1 | MSMEG_5626 | MSMEG_3977 | Luciferase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.430 |
ABK71973.1 | ABK72062.1 | MSMEG_5626 | MSMEG_4967 | Luciferase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.658 |
ABK71973.1 | ABK75450.1 | MSMEG_5626 | MSMEG_2996 | Luciferase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.695 |
ABK72062.1 | ABK69580.1 | MSMEG_4967 | MSMEG_4965 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Hypothetical protein; Identified by Glimmer2; putative. | 0.637 |
ABK72062.1 | ABK69613.1 | MSMEG_4967 | MSMEG_3301 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.724 |
ABK72062.1 | ABK71322.1 | MSMEG_4967 | MSMEG_3977 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | 0.638 |
ABK72062.1 | ABK71935.1 | MSMEG_4967 | MSMEG_4966 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | CalU12 protein; Identified by match to protein family HMM PF05988. | 0.778 |
ABK72062.1 | ABK71973.1 | MSMEG_4967 | MSMEG_5626 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Luciferase; Identified by match to protein family HMM PF00296. | 0.658 |
ABK72062.1 | ABK72828.1 | MSMEG_4967 | MSMEG_5592 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein. | 0.729 |
ABK72062.1 | ABK73168.1 | MSMEG_4967 | MSMEG_1794 | Conserved hypothetical protein; Identified by match to protein family HMM PF00296. | Dehydrogenase; Identified by match to protein family HMM PF00296. | 0.620 |
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