STRINGSTRING
ABK72584.1 ABK72584.1 ABK71043.1 ABK71043.1 ABK70063.1 ABK70063.1 ABK71823.1 ABK71823.1 ABK71106.1 ABK71106.1 ABK72093.1 ABK72093.1 ABK74992.1 ABK74992.1 ABK75804.1 ABK75804.1 ABK72062.1 ABK72062.1 ABK71935.1 ABK71935.1 ABK69580.1 ABK69580.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72584.1Hypothetical protein; Identified by Glimmer2; putative. (295 aa)    
Predicted Functional Partners:
ABK71043.1
Two-component system sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
  
  
 0.813
ABK70063.1
Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545.
  
  
 0.754
ABK71823.1
Membrane spanning protein; Identified by match to protein family HMM PF04020.
  
  
 0.542
ABK71106.1
35 kDa protein; Identified by match to protein family HMM PF04012.
  
  
 0.529
ABK72093.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08044.
  
  
 0.528
ABK74992.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08044.
  
  
 0.522
ABK75804.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08044.
  
  
 0.522
ABK72062.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
    0.517
ABK71935.1
CalU12 protein; Identified by match to protein family HMM PF05988.
  
    0.491
ABK69580.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.406
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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