STRINGSTRING
ABK73938.1 ABK73938.1 ABK72980.1 ABK72980.1 thiC thiC ABK73995.1 ABK73995.1 ABK74432.1 ABK74432.1 ABK74532.1 ABK74532.1 ABK73158.1 ABK73158.1 ABK75396.1 ABK75396.1 ABK71630.1 ABK71630.1 ABK71422.1 ABK71422.1 cysD cysD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK73938.1Isochorismatase hydrolase; Identified by match to protein family HMM PF00857. (198 aa)    
Predicted Functional Partners:
ABK72980.1
Identified by match to protein family HMM PF01243.
 
    0.817
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
  
  
 0.789
ABK73995.1
H-N-H endonuclease F-TflIV.
  
  
 0.769
ABK74432.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
      
 0.733
ABK74532.1
HNH nuclease, putative.
      
 0.733
ABK73158.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
      
 0.733
ABK75396.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
      
 0.733
ABK71630.1
Conserved hypothetical protein.
      
 0.733
ABK71422.1
Rrf2 family protein (putative transcriptional regulator); Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
  
    0.689
cysD
Sulfate adenylyltransferase, small subunit; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039.
  
    0.673
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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