Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69843.1 | ABK71228.1 | MSMEG_4988 | MSMEG_4986 | Integral membrane protein; Identified by match to protein family HMM PF02366. | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | 0.656 |
| ABK69843.1 | ABK72371.1 | MSMEG_4988 | MSMEG_4989 | Integral membrane protein; Identified by match to protein family HMM PF02366. | Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.747 |
| ABK69843.1 | ABK72654.1 | MSMEG_4988 | MSMEG_4990 | Integral membrane protein; Identified by match to protein family HMM PF02366. | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.685 |
| ABK69843.1 | ABK72876.1 | MSMEG_4988 | MSMEG_0014 | Integral membrane protein; Identified by match to protein family HMM PF02366. | Formyl transferase; Identified by match to protein family HMM PF00551; match to protein family HMM PF02911. | 0.441 |
| ABK69843.1 | ABK73170.1 | MSMEG_4988 | MSMEG_4992 | Integral membrane protein; Identified by match to protein family HMM PF02366. | Hypothetical protein; Identified by Glimmer2; putative. | 0.538 |
| ABK69843.1 | ABK74358.1 | MSMEG_4988 | MSMEG_3241 | Integral membrane protein; Identified by match to protein family HMM PF02366. | Conserved hypothetical protein. | 0.445 |
| ABK69843.1 | ABK74393.1 | MSMEG_4988 | MSMEG_4985 | Integral membrane protein; Identified by match to protein family HMM PF02366. | Carbonic anhydrase; Identified by match to protein family HMM PF00484. | 0.521 |
| ABK69843.1 | ABK76211.1 | MSMEG_4988 | MSMEG_4987 | Integral membrane protein; Identified by match to protein family HMM PF02366. | Glycosyl transferase; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138. | 0.942 |
| ABK69843.1 | fmt | MSMEG_4988 | MSMEG_3064 | Integral membrane protein; Identified by match to protein family HMM PF02366. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.438 |
| ABK71228.1 | ABK69843.1 | MSMEG_4986 | MSMEG_4988 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Integral membrane protein; Identified by match to protein family HMM PF02366. | 0.656 |
| ABK71228.1 | ABK72371.1 | MSMEG_4986 | MSMEG_4989 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.662 |
| ABK71228.1 | ABK72654.1 | MSMEG_4986 | MSMEG_4990 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.581 |
| ABK71228.1 | ABK72876.1 | MSMEG_4986 | MSMEG_0014 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Formyl transferase; Identified by match to protein family HMM PF00551; match to protein family HMM PF02911. | 0.438 |
| ABK71228.1 | ABK73170.1 | MSMEG_4986 | MSMEG_4992 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Hypothetical protein; Identified by Glimmer2; putative. | 0.495 |
| ABK71228.1 | ABK74358.1 | MSMEG_4986 | MSMEG_3241 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Conserved hypothetical protein. | 0.491 |
| ABK71228.1 | ABK74393.1 | MSMEG_4986 | MSMEG_4985 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Carbonic anhydrase; Identified by match to protein family HMM PF00484. | 0.650 |
| ABK71228.1 | ABK75880.1 | MSMEG_4986 | MSMEG_0995 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Glycosyl transferase, family protein 2; Identified by match to protein family HMM PF00535. | 0.405 |
| ABK71228.1 | ABK76211.1 | MSMEG_4986 | MSMEG_4987 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | Glycosyl transferase; Identified by match to protein family HMM PF00535; match to protein family HMM PF04138. | 0.967 |
| ABK71228.1 | fmt | MSMEG_4986 | MSMEG_3064 | Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.430 |
| ABK72371.1 | ABK69843.1 | MSMEG_4989 | MSMEG_4988 | Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Integral membrane protein; Identified by match to protein family HMM PF02366. | 0.747 |
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