STRINGSTRING
ABK73170.1 ABK73170.1 ABK75074.1 ABK75074.1 ABK71954.1 ABK71954.1 ABK72371.1 ABK72371.1 ABK72398.1 ABK72398.1 ABK72069.1 ABK72069.1 ABK73864.1 ABK73864.1 ABK72654.1 ABK72654.1 ABK69843.1 ABK69843.1 ABK73990.1 ABK73990.1 ABK73295.1 ABK73295.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73170.1Hypothetical protein; Identified by Glimmer2; putative. (154 aa)    
Predicted Functional Partners:
ABK75074.1
Ubiquinol-cytochrome c reductase cytochrome c subunit; Identified by match to protein family HMM PF00034.
  
 
 0.748
ABK71954.1
Putative non-ribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.
  
  
 0.719
ABK72371.1
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
  
 0.654
ABK72398.1
Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.
  
  
 0.645
ABK72069.1
Conserved hypothetical protein.
  
   
 0.595
ABK73864.1
Conserved hypothetical protein.
  
    0.594
ABK72654.1
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
  
 0.586
ABK69843.1
Integral membrane protein; Identified by match to protein family HMM PF02366.
 
    0.538
ABK73990.1
Conserved hypothetical protein.
 
    0.519
ABK73295.1
Conserved hypothetical protein.
  
    0.509
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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