STRINGSTRING
ABK72551.1 ABK72551.1 ABK70764.1 ABK70764.1 ABK72042.1 ABK72042.1 ABK73261.1 ABK73261.1 ABK72262.1 ABK72262.1 ABK73468.1 ABK73468.1 ABK71564.1 ABK71564.1 lysS lysS pks pks ABK70389.1 ABK70389.1 ABK74049.1 ABK74049.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72551.1Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. (409 aa)    
Predicted Functional Partners:
ABK70764.1
Identified by match to protein family HMM PF00557.
 
 
 
 0.688
ABK72042.1
Identified by match to protein family HMM PF00557.
 
 
 
 0.673
ABK73261.1
Pesticide degrading monooxygenase; Identified by match to protein family HMM PF08028.
  
   0.663
ABK72262.1
Identified by match to protein family HMM PF01636.
 
  
 0.619
ABK73468.1
Putative regulatory protein; Identified by match to protein family HMM PF00196.
 
  
 0.606
ABK71564.1
Identified by match to protein family HMM PF04909.
 
  
 0.600
lysS
lysyl-tRNA synthetase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.590
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
 
 
 0.583
ABK70389.1
Identified by match to protein family HMM PF01636.
 
   
 0.556
ABK74049.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.548
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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