STRINGSTRING
ABK70482.1 ABK70482.1 ABK71593.1 ABK71593.1 ABK72891.1 ABK72891.1 rplS rplS ABK72178.1 ABK72178.1 ABK71514.1 ABK71514.1 ABK75558.1 ABK75558.1 ABK74560.1 ABK74560.1 ABK75153.1 ABK75153.1 ABK72090.1 ABK72090.1 ABK70936.1 ABK70936.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70482.1LprC protein. (186 aa)    
Predicted Functional Partners:
ABK71593.1
LprB protein.
 
  
 0.997
ABK72891.1
Conserved hypothetical protein.
 
    0.788
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
  
   0.786
ABK72178.1
Bacterial extracellular solute-binding protein, family protein 5; Identified by match to protein family HMM PF00496.
 
  
 0.786
ABK71514.1
Secreted protein.
 
    0.780
ABK75558.1
Conserved hypothetical protein.
  
  
 0.775
ABK74560.1
acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643.
  
    0.774
ABK75153.1
Conserved hypothetical protein.
 
    0.774
ABK72090.1
Conserved hypothetical protein.
  
    0.771
ABK70936.1
Conserved hypothetical protein.
 
     0.771
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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