STRINGSTRING
ABK73102.1 ABK73102.1 ABK75869.1 ABK75869.1 ABK71593.1 ABK71593.1 ABK75304.1 ABK75304.1 ABK71537.1 ABK71537.1 ABK76084.1 ABK76084.1 ABK74109.1 ABK74109.1 ABK71801.1 ABK71801.1 eccA1 eccA1 eccA3 eccA3 pks pks
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73102.1ABC transporter; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (625 aa)    
Predicted Functional Partners:
ABK75869.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
  
0.913
ABK71593.1
LprB protein.
  
    0.773
ABK75304.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.710
ABK71537.1
Valosin containing protein-1; Identified by match to protein family HMM PF00004; Belongs to the AAA ATPase family.
 0.695
ABK76084.1
ABC-type multidrug transport system ATPase component; Identified by match to protein family HMM PF00005.
 
 0.671
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
 
0.659
ABK71801.1
ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.
 
0.657
eccA1
ATPase, AAA family protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in both donor and recipient strains. EccA1 exhibits ATPase activity and may provide energy for the export of ESX-1 substrates (By similarity).
  
 0.648
eccA3
ATPase, AAA family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. EccA3 exhibits ATPase activity and may provide energy for the export of ESX-3 substrates (By similarity).
  
 0.647
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
  
 0.639
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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