Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70773.1 | ABK71842.1 | MSMEG_3497 | MSMEG_5010 | Transcriptional regulator, ArsR family protein. | Conserved hypothetical protein. | 0.420 |
ABK71842.1 | ABK70773.1 | MSMEG_5010 | MSMEG_3497 | Conserved hypothetical protein. | Transcriptional regulator, ArsR family protein. | 0.420 |
ABK71842.1 | ABK72601.1 | MSMEG_5010 | MSMEG_5012 | Conserved hypothetical protein. | Trans-sialidase, putative. | 0.569 |
ABK71842.1 | ABK74683.1 | MSMEG_5010 | MSMEG_5194 | Conserved hypothetical protein. | Integral membrane protein; Identified by match to protein family HMM PF07690. | 0.400 |
ABK71842.1 | lipB | MSMEG_5010 | MSMEG_4285 | Conserved hypothetical protein. | Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.516 |
ABK71842.1 | maf | MSMEG_5010 | MSMEG_1811 | Conserved hypothetical protein. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.547 |
ABK72601.1 | ABK71842.1 | MSMEG_5012 | MSMEG_5010 | Trans-sialidase, putative. | Conserved hypothetical protein. | 0.569 |
ABK74683.1 | ABK71842.1 | MSMEG_5194 | MSMEG_5010 | Integral membrane protein; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein. | 0.400 |
lipB | ABK71842.1 | MSMEG_4285 | MSMEG_5010 | Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | Conserved hypothetical protein. | 0.516 |
lipB | maf | MSMEG_4285 | MSMEG_1811 | Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.821 |
maf | ABK71842.1 | MSMEG_1811 | MSMEG_5010 | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Conserved hypothetical protein. | 0.547 |
maf | lipB | MSMEG_1811 | MSMEG_4285 | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.821 |