STRINGSTRING
ABK70195.1 ABK70195.1 ABK72888.1 ABK72888.1 ABK71068.1 ABK71068.1 ABK70596.1 ABK70596.1 ABK74067.1 ABK74067.1 ABK70064.1 ABK70064.1 glgC glgC ABK69823.1 ABK69823.1 ABK72679.1 ABK72679.1 saeC saeC ABK70057.1 ABK70057.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70195.1Secreted protein. (274 aa)    
Predicted Functional Partners:
ABK72888.1
Conserved domain protein; Identified by match to protein family HMM PF00403.
 
  
 0.928
ABK71068.1
Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
  
 0.899
ABK70596.1
Acetoin(diacetyl) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR02415; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.715
ABK74067.1
Lipoprotein; Identified by match to protein family HMM PF03713.
 
    0.691
ABK70064.1
Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211.
  
   0.612
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose building block, required in the biosynthesis of maltose-1-phosphate (M1P) and in the elongation reactions to produce linear alpha-1,4-glucans. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.
   
  
 0.611
ABK69823.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02583.
  
  
 0.576
ABK72679.1
Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.
  
 0.574
saeC
Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain.
   
 0.563
ABK70057.1
Identified by match to protein family HMM PF01590.
       0.545
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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