Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69823.1 | ABK70091.1 | MSMEG_0230 | MSMEG_6058 | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.417 |
ABK69823.1 | ABK70195.1 | MSMEG_0230 | MSMEG_5015 | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | Secreted protein. | 0.576 |
ABK69823.1 | ABK71068.1 | MSMEG_0230 | MSMEG_5014 | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | 0.691 |
ABK69823.1 | ABK72888.1 | MSMEG_0230 | MSMEG_5016 | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | Conserved domain protein; Identified by match to protein family HMM PF00403. | 0.827 |
ABK69823.1 | ABK72906.1 | MSMEG_0230 | MSMEG_0755 | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | 0.529 |
ABK69823.1 | cadA | MSMEG_0230 | MSMEG_5403 | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | Cadmium-translocating P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. | 0.492 |
ABK70064.1 | ABK70195.1 | MSMEG_5018 | MSMEG_5015 | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Secreted protein. | 0.612 |
ABK70064.1 | ABK71068.1 | MSMEG_5018 | MSMEG_5014 | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | 0.526 |
ABK70064.1 | ABK72888.1 | MSMEG_5018 | MSMEG_5016 | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Conserved domain protein; Identified by match to protein family HMM PF00403. | 0.568 |
ABK70064.1 | ABK72906.1 | MSMEG_5018 | MSMEG_0755 | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | 0.401 |
ABK70064.1 | ABK74067.1 | MSMEG_5018 | MSMEG_5017 | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Lipoprotein; Identified by match to protein family HMM PF03713. | 0.719 |
ABK70091.1 | ABK69823.1 | MSMEG_6058 | MSMEG_0230 | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | 0.417 |
ABK70091.1 | ABK72888.1 | MSMEG_6058 | MSMEG_5016 | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Conserved domain protein; Identified by match to protein family HMM PF00403. | 0.879 |
ABK70091.1 | ABK72906.1 | MSMEG_6058 | MSMEG_0755 | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | 0.611 |
ABK70091.1 | sodC | MSMEG_6058 | MSMEG_0835 | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Copper/zinc superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.583 |
ABK70195.1 | ABK69823.1 | MSMEG_5015 | MSMEG_0230 | Secreted protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02583. | 0.576 |
ABK70195.1 | ABK70064.1 | MSMEG_5015 | MSMEG_5018 | Secreted protein. | Adenylate and Guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | 0.612 |
ABK70195.1 | ABK71068.1 | MSMEG_5015 | MSMEG_5014 | Secreted protein. | Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. | 0.899 |
ABK70195.1 | ABK72888.1 | MSMEG_5015 | MSMEG_5016 | Secreted protein. | Conserved domain protein; Identified by match to protein family HMM PF00403. | 0.928 |
ABK70195.1 | ABK72906.1 | MSMEG_5015 | MSMEG_0755 | Secreted protein. | Cobalt-zinc-cadmium resistance protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297. | 0.432 |
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