STRINGSTRING
ABK73299.1 ABK73299.1 ABK71469.1 ABK71469.1 ABK76105.1 ABK76105.1 ABK74287.1 ABK74287.1 ABK74749.1 ABK74749.1 ABK73998.1 ABK73998.1 ABK72099.1 ABK72099.1 ABK72411.1 ABK72411.1 ABK75945.1 ABK75945.1 pknB pknB ABK70596.1 ABK70596.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73299.1Chitooligosaccharide deacetylase; Identified by match to protein family HMM PF01522. (235 aa)    
Predicted Functional Partners:
ABK71469.1
Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142.
 
  
 0.849
ABK76105.1
T/U mismatch-specific DNA glycosylase.
 
    0.815
ABK74287.1
Flavin-containing monooxygenase FMO; Identified by match to protein family HMM PF07992.
  
    0.664
ABK74749.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02720.
  
    0.633
ABK73998.1
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107.
  
    0.486
ABK72099.1
Probable membrane sugar transferase; Identified by match to protein family HMM PF00535.
  
  
 0.453
ABK72411.1
Conserved hypothetical protein.
  
  
 0.441
ABK75945.1
Identified by match to protein family HMM PF00481.
  
    0.439
pknB
Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA.
 
  
 0.436
ABK70596.1
Acetoin(diacetyl) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR02415; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.432
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]