STRINGSTRING
ABK75253.1 ABK75253.1 ABK75207.1 ABK75207.1 ABK75144.1 ABK75144.1 mutM mutM ABK71600.1 ABK71600.1 ABK70019.1 ABK70019.1 ABK69677.1 ABK69677.1 gpmA gpmA ABK72581.1 ABK72581.1 ABK71227.1 ABK71227.1 mutY mutY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK75253.1uracil-DNA glycosylase superfamily protein; Identified by match to protein family HMM PF03167. (290 aa)    
Predicted Functional Partners:
ABK75207.1
Uracil DNA glycosylase superfamily protein; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758.
  
 
  0.913
ABK75144.1
Alkanal monooxygenase alpha chain; Identified by match to protein family HMM PF00296.
  
    0.824
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Acts on oxidized purines, such as 7,8-dihydro-8- oxoguanine (8-oxoG) when paired with C, G or T. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates; Belongs to the FPG family.
  
  
 0.629
ABK71600.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04343.
 
    0.623
ABK70019.1
Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814.
  
    0.490
ABK69677.1
Molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.
  
  
 0.490
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.458
ABK72581.1
Hypothetical protein; Identified by Glimmer2; putative.
  
   0.456
ABK71227.1
Conserved hypothetical protein.
  
   0.449
mutY
Base excision DNA repair protein, HhH-GPD family protein; Adenine glycosylase active on G:A and C:A mispairs, as well as processing 7,8-dihydro-8-oxoguanine:A (8-oxoG) mismatches. Belongs to the Nth/MutY family.
   
  
 0.447
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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