STRINGSTRING
ABK69678.1 ABK69678.1 ABK72566.1 ABK72566.1 ABK74357.1 ABK74357.1 ABK73067.1 ABK73067.1 ABK72784.1 ABK72784.1 ABK70024.1 ABK70024.1 ABK73356.1 ABK73356.1 ABK71145.1 ABK71145.1 ABK73987.1 ABK73987.1 ABK74379.1 ABK74379.1 ABK70350.1 ABK70350.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69678.1Conserved hypothetical protein; Belongs to the UPF0311 family. (160 aa)    
Predicted Functional Partners:
ABK72566.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.772
ABK74357.1
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
  
  
 0.755
ABK73067.1
Putative transcriptional regulator; Identified by match to protein family HMM PF01638.
  
    0.561
ABK72784.1
C-5 sterol desaturase.
   
 
 0.517
ABK70024.1
C-5 sterol desaturase.
   
 
 0.513
ABK73356.1
C-5 sterol desaturase.
   
 
 0.513
ABK71145.1
Fatty acid hydroxylase; Identified by match to protein family HMM PF04116.
   
 
 0.508
ABK73987.1
Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
 
    0.430
ABK74379.1
Putative carboxylesterase protein; Identified by match to protein family HMM PF00561.
 
  
 0.421
ABK70350.1
Steroid monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992.
 
 
 0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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