ABK76075.1 protein (Mycolicibacterium smegmatis)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ABK76075.1

LprE protein. (179 aa)

Predicted Functional Partners:

ABK73328.1

0.915

dut

0.894

deaD

0.841

ABK70355.1

0.781

ABK74336.1

0.778

ABK73946.1

0.762

ABK73557.1

0.759

ABK70225.1

0.759

ABK76192.1

0.756

polA

0.751

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70225.1	ABK70355.1	MSMEG_6109	MSMEG_0806	LpqG protein; Identified by match to protein family HMM PF04402.	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	0.781
ABK70225.1	ABK73557.1	MSMEG_6109	MSMEG_0704	LpqG protein; Identified by match to protein family HMM PF04402.	LpqJ protein.	0.761
ABK70225.1	ABK73946.1	MSMEG_6109	MSMEG_5879	LpqG protein; Identified by match to protein family HMM PF04402.	D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.	0.757
ABK70225.1	ABK76075.1	MSMEG_6109	MSMEG_5043	LpqG protein; Identified by match to protein family HMM PF04402.	LprE protein.	0.759
ABK70225.1	ABK76192.1	MSMEG_6109	MSMEG_6369	LpqG protein; Identified by match to protein family HMM PF04402.	O-antigen export system, permease protein; Identified by match to protein family HMM PF01061.	0.754
ABK70355.1	ABK70225.1	MSMEG_0806	MSMEG_6109	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	LpqG protein; Identified by match to protein family HMM PF04402.	0.781
ABK70355.1	ABK73328.1	MSMEG_0806	MSMEG_5044	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	ATPase.	0.441
ABK70355.1	ABK73557.1	MSMEG_0806	MSMEG_0704	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	LpqJ protein.	0.763
ABK70355.1	ABK73946.1	MSMEG_0806	MSMEG_5879	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.	0.762
ABK70355.1	ABK76075.1	MSMEG_0806	MSMEG_5043	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	LprE protein.	0.781
ABK70355.1	ABK76192.1	MSMEG_0806	MSMEG_6369	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	O-antigen export system, permease protein; Identified by match to protein family HMM PF01061.	0.756
ABK73328.1	ABK70355.1	MSMEG_5044	MSMEG_0806	ATPase.	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	0.441
ABK73328.1	ABK74336.1	MSMEG_5044	MSMEG_5041	ATPase.	Probable acyltransferase; Identified by match to protein family HMM PF01757.	0.725
ABK73328.1	ABK76075.1	MSMEG_5044	MSMEG_5043	ATPase.	LprE protein.	0.915
ABK73328.1	deaD	MSMEG_5044	MSMEG_5042	ATPase.	ATP-dependent rna helicase, dead/deah box family protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.	0.525
ABK73557.1	ABK70225.1	MSMEG_0704	MSMEG_6109	LpqJ protein.	LpqG protein; Identified by match to protein family HMM PF04402.	0.761
ABK73557.1	ABK70355.1	MSMEG_0704	MSMEG_0806	LpqJ protein.	Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.	0.763
ABK73557.1	ABK73946.1	MSMEG_0704	MSMEG_5879	LpqJ protein.	D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.	0.762
ABK73557.1	ABK76075.1	MSMEG_0704	MSMEG_5043	LpqJ protein.	LprE protein.	0.759
ABK73557.1	ABK76192.1	MSMEG_0704	MSMEG_6369	LpqJ protein.	O-antigen export system, permease protein; Identified by match to protein family HMM PF01061.	0.753