STRINGSTRING
ABK75366.1 ABK75366.1 ABK69749.1 ABK69749.1 ABK70794.1 ABK70794.1 ABK74713.1 ABK74713.1 ABK69817.1 ABK69817.1 ABK75950.1 ABK75950.1 ABK69926.1 ABK69926.1 corA corA ABK73222.1 ABK73222.1 ABK75164.1 ABK75164.1 ABK73863.1 ABK73863.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75366.1Lipoprotein LpqZ; Identified by match to protein family HMM PF04069. (280 aa)    
Predicted Functional Partners:
ABK69749.1
NAD-dependent malic enzyme; Identified by match to protein family HMM PF00390; match to protein family HMM PF03949.
       0.894
ABK70794.1
Amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.857
ABK74713.1
Amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.814
ABK69817.1
Conserved hypothetical protein.
 
    0.763
ABK75950.1
ABC transporter, permease protein ProZ; Identified by match to protein family HMM PF00528.
 
  
 0.761
ABK69926.1
Glycine betaine/carnitine/choline transport ATP-binding protein opuCA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.
  
 
 0.731
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
    0.619
ABK73222.1
Conserved hypothetical protein.
  
     0.565
ABK75164.1
Bacterial extracellular solute-binding protein, family protein 5; Identified by match to protein family HMM PF00496.
  
 
 0.549
ABK73863.1
Conserved hypothetical protein.
  
     0.543
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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