Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70379.1 | ABK74614.1 | MSMEG_2771 | MSMEG_5065 | TrkA protein; Identified by match to protein family HMM PF02254. | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | 0.476 |
| ABK70379.1 | ABK74825.1 | MSMEG_2771 | MSMEG_2769 | TrkA protein; Identified by match to protein family HMM PF02254. | TrkB protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254. | 0.956 |
| ABK70379.1 | ABK76195.1 | MSMEG_2771 | MSMEG_2768 | TrkA protein; Identified by match to protein family HMM PF02254. | OB-fold nucleic acid binding domain protein; Identified by match to protein family HMM PF01336. | 0.740 |
| ABK73477.1 | ABK74614.1 | MSMEG_0111 | MSMEG_5065 | Putative magnesium transport protein; Identified by match to protein family HMM PF01544. | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | 0.417 |
| ABK73693.1 | ABK74614.1 | MSMEG_5068 | MSMEG_5065 | Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | 0.574 |
| ABK73693.1 | ABK75359.1 | MSMEG_5068 | MSMEG_5064 | Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | 0.427 |
| ABK73693.1 | ABK75551.1 | MSMEG_5068 | MSMEG_5066 | Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Integral membrane protein; Identified by match to protein family HMM PF06210. | 0.598 |
| ABK73693.1 | ABK76085.1 | MSMEG_5068 | MSMEG_5067 | Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Secreted protein. | 0.834 |
| ABK73952.1 | ABK74614.1 | MSMEG_5063 | MSMEG_5065 | Integral membrane protein. | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | 0.627 |
| ABK73952.1 | ABK75551.1 | MSMEG_5063 | MSMEG_5066 | Integral membrane protein. | Integral membrane protein; Identified by match to protein family HMM PF06210. | 0.607 |
| ABK74614.1 | ABK70379.1 | MSMEG_5065 | MSMEG_2771 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | TrkA protein; Identified by match to protein family HMM PF02254. | 0.476 |
| ABK74614.1 | ABK73477.1 | MSMEG_5065 | MSMEG_0111 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | Putative magnesium transport protein; Identified by match to protein family HMM PF01544. | 0.417 |
| ABK74614.1 | ABK73693.1 | MSMEG_5065 | MSMEG_5068 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.574 |
| ABK74614.1 | ABK73952.1 | MSMEG_5065 | MSMEG_5063 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | Integral membrane protein. | 0.627 |
| ABK74614.1 | ABK74825.1 | MSMEG_5065 | MSMEG_2769 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | TrkB protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254. | 0.455 |
| ABK74614.1 | ABK75359.1 | MSMEG_5065 | MSMEG_5064 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. | 0.627 |
| ABK74614.1 | ABK75551.1 | MSMEG_5065 | MSMEG_5066 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | Integral membrane protein; Identified by match to protein family HMM PF06210. | 0.972 |
| ABK74614.1 | ABK76085.1 | MSMEG_5065 | MSMEG_5067 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | Secreted protein. | 0.772 |
| ABK74614.1 | ABK76195.1 | MSMEG_5065 | MSMEG_2768 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | OB-fold nucleic acid binding domain protein; Identified by match to protein family HMM PF01336. | 0.478 |
| ABK74614.1 | secF | MSMEG_5065 | MSMEG_2962 | Mg/Co/Ni transporter MgtE; Identified by match to protein family HMM PF00571; match to protein family HMM PF03448. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.422 |
page 1 of 2