STRINGSTRING
ABK73545.1 ABK73545.1 tag tag ABK72696.1 ABK72696.1 ABK69890.1 ABK69890.1 ABK69690.1 ABK69690.1 ABK74620.1 ABK74620.1 ABK71106.1 ABK71106.1 ABK73146.1 ABK73146.1 ABK74693.1 ABK74693.1 ABK73241.1 ABK73241.1 rseA rseA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73545.1Conserved hypothetical protein. (127 aa)    
Predicted Functional Partners:
tag
DNA-3-methyladenine glycosylase I; Identified by match to protein family HMM PF03352; match to protein family HMM TIGR00624.
  
    0.818
ABK72696.1
Conserved hypothetical protein.
  
   
 0.782
ABK69890.1
Conserved hypothetical protein.
  
    0.773
ABK69690.1
Conserved hypothetical protein.
  
    0.773
ABK74620.1
Conserved hypothetical protein.
  
     0.770
ABK71106.1
35 kDa protein; Identified by match to protein family HMM PF04012.
  
  
 0.769
ABK73146.1
Putative secreted alanine rich protein.
  
    0.769
ABK74693.1
Conserved hypothetical protein.
  
    0.768
ABK73241.1
Conserved hypothetical protein.
 
    0.767
rseA
Conserved hypothetical protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily.
  
    0.764
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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