STRINGSTRING
ABK73457.1 ABK73457.1 ABK75907.1 ABK75907.1 ABK73540.1 ABK73540.1 ABK74109.1 ABK74109.1 recA recA ABK71329.1 ABK71329.1 fhaB fhaB ABK73969.1 ABK73969.1 garA garA ABK72372.1 ABK72372.1 ABK70922.1 ABK70922.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK73457.1Hypothetical protein; Identified by Glimmer2; putative. (312 aa)    
Predicted Functional Partners:
ABK75907.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.624
ABK73540.1
Conserved hypothetical protein.
  
    0.511
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
  
  
 0.436
recA
Protein RecA; Required for homologous recombination (HR) and the bypass of mutagenic DNA lesions (double strand breaks, DSB) by the SOS response. Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. Numerous X-ray crystals have been resolved under different conditions which indicate the flexibility of the protein, essential to its function. Gln-196 contributes to this plasticity by acting as a switch residue, which transmits the ef [...]
  
  
 0.429
ABK71329.1
Identified by match to protein family HMM PF00232.
  
 
 0.422
fhaB
FHA domain protein; Regulates growth and cell division. Probably required for divisomal protein assembly under oxidative stress.
  
  
 0.421
ABK73969.1
FHA domain protein; Identified by match to protein family HMM PF00498.
  
  
 0.421
garA
Forkhead-associated protein; Involved in regulation of glutamate metabolism. Acts as a phosphorylation-dependent molecular switch that modulates the activities of Kgd and Gdh.
  
  
 0.414
ABK72372.1
Conserved hypothetical protein.
  
  
 0.407
ABK70922.1
Probable forkhead-associated protein.
  
  
 0.406
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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