Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69865.1 | ABK72287.1 | MSMEG_3487 | MSMEG_5107 | Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. | Secreted protein. | 0.500 |
ABK69865.1 | ABK72719.1 | MSMEG_3487 | MSMEG_6850 | Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. | Alpha/beta hydrolase. | 0.456 |
ABK69865.1 | ABK74611.1 | MSMEG_3487 | MSMEG_3470 | Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. | NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | 0.521 |
ABK70115.1 | ABK72287.1 | MSMEG_3842 | MSMEG_5107 | Putative esterase. | Secreted protein. | 0.505 |
ABK70115.1 | ABK72343.1 | MSMEG_3842 | MSMEG_6838 | Putative esterase. | Putative esterase. | 0.700 |
ABK70593.1 | ABK72287.1 | MSMEG_5763 | MSMEG_5107 | Conserved hypothetical protein. | Secreted protein. | 0.771 |
ABK70593.1 | ABK72343.1 | MSMEG_5763 | MSMEG_6838 | Conserved hypothetical protein. | Putative esterase. | 0.587 |
ABK70593.1 | ABK72895.1 | MSMEG_5763 | MSMEG_1797 | Conserved hypothetical protein. | Salicylate esterase; Identified by match to protein family HMM PF00561. | 0.609 |
ABK70593.1 | ABK73713.1 | MSMEG_5763 | MSMEG_5109 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.465 |
ABK70593.1 | ABK74611.1 | MSMEG_5763 | MSMEG_3470 | Conserved hypothetical protein. | NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | 0.506 |
ABK72287.1 | ABK69865.1 | MSMEG_5107 | MSMEG_3487 | Secreted protein. | Metal-dependent phosphohydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. | 0.500 |
ABK72287.1 | ABK70115.1 | MSMEG_5107 | MSMEG_3842 | Secreted protein. | Putative esterase. | 0.505 |
ABK72287.1 | ABK70593.1 | MSMEG_5107 | MSMEG_5763 | Secreted protein. | Conserved hypothetical protein. | 0.771 |
ABK72287.1 | ABK72343.1 | MSMEG_5107 | MSMEG_6838 | Secreted protein. | Putative esterase. | 0.564 |
ABK72287.1 | ABK72719.1 | MSMEG_5107 | MSMEG_6850 | Secreted protein. | Alpha/beta hydrolase. | 0.553 |
ABK72287.1 | ABK72895.1 | MSMEG_5107 | MSMEG_1797 | Secreted protein. | Salicylate esterase; Identified by match to protein family HMM PF00561. | 0.657 |
ABK72287.1 | ABK73713.1 | MSMEG_5107 | MSMEG_5109 | Secreted protein. | Conserved hypothetical protein. | 0.824 |
ABK72287.1 | ABK74277.1 | MSMEG_5107 | MSMEG_2311 | Secreted protein. | Conserved hypothetical protein. | 0.518 |
ABK72287.1 | ABK74611.1 | MSMEG_5107 | MSMEG_3470 | Secreted protein. | NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. | 0.694 |
ABK72287.1 | ABK75160.1 | MSMEG_5107 | MSMEG_1031 | Secreted protein. | Conserved hypothetical protein. | 0.512 |
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