Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69872.1 | ABK73190.1 | MSMEG_5115 | MSMEG_5112 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.776 |
ABK69872.1 | ABK73958.1 | MSMEG_5115 | MSMEG_5111 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.732 |
ABK72873.1 | ABK73958.1 | MSMEG_0244 | MSMEG_5111 | Two component response transcriptional regulatory protein prra; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Conserved hypothetical protein. | 0.588 |
ABK72873.1 | ABK74047.1 | MSMEG_0244 | MSMEG_0246 | Two component response transcriptional regulatory protein prra; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.990 |
ABK72873.1 | ABK75033.1 | MSMEG_0244 | MSMEG_5663 | Two component response transcriptional regulatory protein prra; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.997 |
ABK73190.1 | ABK69872.1 | MSMEG_5112 | MSMEG_5115 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.776 |
ABK73190.1 | ABK73958.1 | MSMEG_5112 | MSMEG_5111 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.768 |
ABK73958.1 | ABK69872.1 | MSMEG_5111 | MSMEG_5115 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.732 |
ABK73958.1 | ABK72873.1 | MSMEG_5111 | MSMEG_0244 | Conserved hypothetical protein. | Two component response transcriptional regulatory protein prra; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.588 |
ABK73958.1 | ABK73190.1 | MSMEG_5111 | MSMEG_5112 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.768 |
ABK73958.1 | ABK74047.1 | MSMEG_5111 | MSMEG_0246 | Conserved hypothetical protein. | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.587 |
ABK73958.1 | ABK75033.1 | MSMEG_5111 | MSMEG_5663 | Conserved hypothetical protein. | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.685 |
ABK74047.1 | ABK72873.1 | MSMEG_0246 | MSMEG_0244 | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Two component response transcriptional regulatory protein prra; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.990 |
ABK74047.1 | ABK73958.1 | MSMEG_0246 | MSMEG_5111 | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Conserved hypothetical protein. | 0.587 |
ABK74047.1 | ABK75033.1 | MSMEG_0246 | MSMEG_5663 | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.427 |
ABK75033.1 | ABK72873.1 | MSMEG_5663 | MSMEG_0244 | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Two component response transcriptional regulatory protein prra; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.997 |
ABK75033.1 | ABK73958.1 | MSMEG_5663 | MSMEG_5111 | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Conserved hypothetical protein. | 0.685 |
ABK75033.1 | ABK74047.1 | MSMEG_5663 | MSMEG_0246 | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | Sensor-type histidine kinase PrrB; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.427 |