Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69829.1 | ABK70758.1 | MSMEG_5145 | MSMEG_5143 | Identified by match to protein family HMM PF01547. | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | 0.587 |
| ABK69829.1 | ABK70781.1 | MSMEG_5145 | MSMEG_5144 | Identified by match to protein family HMM PF01547. | Xylosidase/arabinosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family. | 0.783 |
| ABK69829.1 | ABK71329.1 | MSMEG_5145 | MSMEG_5142 | Identified by match to protein family HMM PF01547. | Identified by match to protein family HMM PF00232. | 0.541 |
| ABK69829.1 | ABK74573.1 | MSMEG_5145 | MSMEG_5147 | Identified by match to protein family HMM PF01547. | Sugar ABC-transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.993 |
| ABK69829.1 | ABK75276.1 | MSMEG_5145 | MSMEG_5146 | Identified by match to protein family HMM PF01547. | Binding protein dependent transport protein; Identified by match to protein family HMM PF00528. | 0.993 |
| ABK69829.1 | ABK75431.1 | MSMEG_5145 | MSMEG_5141 | Identified by match to protein family HMM PF01547. | Nitrate/nitrite transporter protein; Identified by match to protein family HMM PF07690. | 0.432 |
| ABK70758.1 | ABK69829.1 | MSMEG_5143 | MSMEG_5145 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Identified by match to protein family HMM PF01547. | 0.587 |
| ABK70758.1 | ABK70781.1 | MSMEG_5143 | MSMEG_5144 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Xylosidase/arabinosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family. | 0.877 |
| ABK70758.1 | ABK71329.1 | MSMEG_5143 | MSMEG_5142 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Identified by match to protein family HMM PF00232. | 0.752 |
| ABK70758.1 | ABK74573.1 | MSMEG_5143 | MSMEG_5147 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Sugar ABC-transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.539 |
| ABK70758.1 | ABK75176.1 | MSMEG_5143 | MSMEG_5140 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Nitrate reductase, alpha subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.642 |
| ABK70758.1 | ABK75276.1 | MSMEG_5143 | MSMEG_5146 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Binding protein dependent transport protein; Identified by match to protein family HMM PF00528. | 0.555 |
| ABK70758.1 | ABK75431.1 | MSMEG_5143 | MSMEG_5141 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Nitrate/nitrite transporter protein; Identified by match to protein family HMM PF07690. | 0.727 |
| ABK70758.1 | narH | MSMEG_5143 | MSMEG_5139 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Nitrate reductase, beta subunit; Identified by match to protein family HMM TIGR01660. | 0.644 |
| ABK70758.1 | narI | MSMEG_5143 | MSMEG_5137 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Respiratory nitrate reductase, gamma subunit; Identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351. | 0.654 |
| ABK70758.1 | narJ | MSMEG_5143 | MSMEG_5138 | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Nitrate reductase molybdenum cofactor assembly chaperone; Identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684. | 0.642 |
| ABK70781.1 | ABK69829.1 | MSMEG_5144 | MSMEG_5145 | Xylosidase/arabinosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family. | Identified by match to protein family HMM PF01547. | 0.783 |
| ABK70781.1 | ABK70758.1 | MSMEG_5144 | MSMEG_5143 | Xylosidase/arabinosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family. | HTH-type transcriptional regulator DegA; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | 0.877 |
| ABK70781.1 | ABK71329.1 | MSMEG_5144 | MSMEG_5142 | Xylosidase/arabinosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family. | Identified by match to protein family HMM PF00232. | 0.808 |
| ABK70781.1 | ABK74573.1 | MSMEG_5144 | MSMEG_5147 | Xylosidase/arabinosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family. | Sugar ABC-transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.571 |
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