Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70168.1 | ABK75451.1 | MSMEG_4455 | MSMEG_5156 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Base excision DNA repair protein, HhH-GPD family protein; Identified by match to protein family HMM PF00730. | 0.683 |
| ABK70606.1 | ABK72031.1 | MSMEG_5545 | MSMEG_3883 | formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | 0.678 |
| ABK70606.1 | ABK75451.1 | MSMEG_5545 | MSMEG_5156 | formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | Base excision DNA repair protein, HhH-GPD family protein; Identified by match to protein family HMM PF00730. | 0.639 |
| ABK70606.1 | ligC | MSMEG_5545 | MSMEG_6302 | formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (By similarity). Has weak intrinsic nick joining activities and accumulates DNA-adenylate. Acts as a backup for LigD in the Ku-LigD-dependent NHEJ pathway. Belongs to the ATP-dependent DNA ligase family. | 0.605 |
| ABK70606.1 | ligC2 | MSMEG_5545 | MSMEG_6304 | formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (By similarity). Has weak intrinsic nick joining activities and accumulates DNA-adenylate. Acts as a backup for LigD in the Ku-LigD-dependent NHEJ pathway. | 0.658 |
| ABK70606.1 | polA | MSMEG_5545 | MSMEG_3839 | formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.852 |
| ABK70620.1 | ABK72031.1 | MSMEG_1383 | MSMEG_3883 | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | 0.437 |
| ABK70620.1 | ABK75451.1 | MSMEG_1383 | MSMEG_5156 | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | Base excision DNA repair protein, HhH-GPD family protein; Identified by match to protein family HMM PF00730. | 0.601 |
| ABK70620.1 | ligC | MSMEG_1383 | MSMEG_6302 | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (By similarity). Has weak intrinsic nick joining activities and accumulates DNA-adenylate. Acts as a backup for LigD in the Ku-LigD-dependent NHEJ pathway. Belongs to the ATP-dependent DNA ligase family. | 0.664 |
| ABK70620.1 | ligC2 | MSMEG_1383 | MSMEG_6304 | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (By similarity). Has weak intrinsic nick joining activities and accumulates DNA-adenylate. Acts as a backup for LigD in the Ku-LigD-dependent NHEJ pathway. | 0.663 |
| ABK70620.1 | polA | MSMEG_1383 | MSMEG_3839 | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.758 |
| ABK70620.1 | xth | MSMEG_1383 | MSMEG_0829 | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633. | 0.773 |
| ABK70620.1 | xth-2 | MSMEG_1383 | MSMEG_1656 | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633. | 0.739 |
| ABK71282.1 | ABK75451.1 | MSMEG_3532 | MSMEG_5156 | Identified by match to protein family HMM PF00291. | Base excision DNA repair protein, HhH-GPD family protein; Identified by match to protein family HMM PF00730. | 0.590 |
| ABK72031.1 | ABK70606.1 | MSMEG_3883 | MSMEG_5545 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | formamidopyrimidine-DNA glycosylase; Identified by match to protein family HMM PF01149; match to protein family HMM PF06831; Belongs to the FPG family. | 0.678 |
| ABK72031.1 | ABK70620.1 | MSMEG_3883 | MSMEG_1383 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587. | 0.437 |
| ABK72031.1 | ABK75451.1 | MSMEG_3883 | MSMEG_5156 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | Base excision DNA repair protein, HhH-GPD family protein; Identified by match to protein family HMM PF00730. | 0.595 |
| ABK72031.1 | ligC | MSMEG_3883 | MSMEG_6302 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (By similarity). Has weak intrinsic nick joining activities and accumulates DNA-adenylate. Acts as a backup for LigD in the Ku-LigD-dependent NHEJ pathway. Belongs to the ATP-dependent DNA ligase family. | 0.856 |
| ABK72031.1 | ligC2 | MSMEG_3883 | MSMEG_6304 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (By similarity). Has weak intrinsic nick joining activities and accumulates DNA-adenylate. Acts as a backup for LigD in the Ku-LigD-dependent NHEJ pathway. | 0.863 |
| ABK72031.1 | polA | MSMEG_3883 | MSMEG_3839 | 5'-3' exonuclease; Identified by match to protein family HMM PF01367; match to protein family HMM PF02739. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.787 |
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