Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70663.1 | ABK71486.1 | MSMEG_5869 | MSMEG_3239 | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. | Two-component system sensor kinase; Identified by match to protein family HMM PF02518. | 0.421 |
ABK70663.1 | ABK71912.1 | MSMEG_5869 | MSMEG_5255 | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. | Conserved hypothetical protein. | 0.479 |
ABK70663.1 | ABK73118.1 | MSMEG_5869 | MSMEG_5168 | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. | Conserved hypothetical protein. | 0.620 |
ABK70663.1 | ABK73311.1 | MSMEG_5869 | MSMEG_1148 | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.427 |
ABK70663.1 | ABK75115.1 | MSMEG_5869 | MSMEG_1143 | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.513 |
ABK70957.1 | ABK71204.1 | MSMEG_4729 | MSMEG_0391 | Conserved hypothetical protein. | Rmt3 protein. | 0.760 |
ABK70957.1 | ABK73118.1 | MSMEG_4729 | MSMEG_5168 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.591 |
ABK70957.1 | ABK73311.1 | MSMEG_4729 | MSMEG_1148 | Conserved hypothetical protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.491 |
ABK70957.1 | ABK75115.1 | MSMEG_4729 | MSMEG_1143 | Conserved hypothetical protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.599 |
ABK71204.1 | ABK70957.1 | MSMEG_0391 | MSMEG_4729 | Rmt3 protein. | Conserved hypothetical protein. | 0.760 |
ABK71204.1 | ABK73118.1 | MSMEG_0391 | MSMEG_5168 | Rmt3 protein. | Conserved hypothetical protein. | 0.554 |
ABK71204.1 | ABK73311.1 | MSMEG_0391 | MSMEG_1148 | Rmt3 protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.525 |
ABK71204.1 | ABK75115.1 | MSMEG_0391 | MSMEG_1143 | Rmt3 protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.653 |
ABK71486.1 | ABK70663.1 | MSMEG_3239 | MSMEG_5869 | Two-component system sensor kinase; Identified by match to protein family HMM PF02518. | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. | 0.421 |
ABK71486.1 | ABK73118.1 | MSMEG_3239 | MSMEG_5168 | Two-component system sensor kinase; Identified by match to protein family HMM PF02518. | Conserved hypothetical protein. | 0.645 |
ABK71486.1 | ABK75115.1 | MSMEG_3239 | MSMEG_1143 | Two-component system sensor kinase; Identified by match to protein family HMM PF02518. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.409 |
ABK71912.1 | ABK70663.1 | MSMEG_5255 | MSMEG_5869 | Conserved hypothetical protein. | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. | 0.479 |
ABK71912.1 | ABK72764.1 | MSMEG_5255 | MSMEG_1517 | Conserved hypothetical protein. | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | 0.455 |
ABK71912.1 | ABK73118.1 | MSMEG_5255 | MSMEG_5168 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.650 |
ABK71912.1 | ABK73311.1 | MSMEG_5255 | MSMEG_1148 | Conserved hypothetical protein. | Mce related protein; Identified by match to protein family HMM PF02470. | 0.600 |
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