STRINGSTRING
ABK72943.1 ABK72943.1 ABK74209.1 ABK74209.1 ABK73917.1 ABK73917.1 ABK74867.1 ABK74867.1 ABK75616.1 ABK75616.1 ABK72314.1 ABK72314.1 ABK74515.1 ABK74515.1 ABK76173.1 ABK76173.1 ABK71038.1 ABK71038.1 ABK74121.1 ABK74121.1 ABK75334.1 ABK75334.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72943.1Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. (147 aa)    
Predicted Functional Partners:
ABK74209.1
Conserved hypothetical protein.
  
    0.792
ABK73917.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
  
  
 0.616
ABK74867.1
Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
  
    0.574
ABK75616.1
Conserved hypothetical protein.
  
    0.564
ABK72314.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08002.
  
    0.563
ABK74515.1
Conserved hypothetical protein.
 
   
 0.509
ABK76173.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
  
   
 0.507
ABK71038.1
O-methyltransferase, putative; Identified by match to protein family HMM PF02409.
  
    0.499
ABK74121.1
Conserved hypothetical protein.
 
   
 0.489
ABK75334.1
Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026.
  
   
 0.466
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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