STRINGSTRING
ABK69603.1 ABK69603.1 ABK73951.1 ABK73951.1 ABK75699.1 ABK75699.1 ABK73659.1 ABK73659.1 ABK76213.1 ABK76213.1 ABK72295.1 ABK72295.1 ABK73957.1 ABK73957.1 ABK73459.1 ABK73459.1 ABK75348.1 ABK75348.1 ABK74109.1 ABK74109.1 ABK73989.1 ABK73989.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69603.1Caax amino protease family protein; Identified by match to protein family HMM PF02517. (227 aa)    
Predicted Functional Partners:
ABK73951.1
Oxidoreductase; Identified by match to protein family HMM PF01370; match to protein family HMM PF05368.
 
    0.916
ABK75699.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.776
ABK73659.1
Identified by match to protein family HMM PF03734.
 
   
 0.689
ABK76213.1
Identified by match to protein family HMM PF03734.
  
  
 0.627
ABK72295.1
Identified by match to protein family HMM PF03734.
 
  
 0.605
ABK73957.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04607.
 
    0.583
ABK73459.1
Aldo/keto reductase; Identified by match to protein family HMM PF00248.
  
    0.565
ABK75348.1
Identified by match to protein family HMM PF03734.
  
  
 0.564
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
  
  
 0.505
ABK73989.1
Conserved hypothetical protein.
 
    0.503
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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