Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69720.1 | ABK72517.1 | MSMEG_2906 | MSMEG_5920 | Conserved hypothetical protein. | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | 0.667 |
| ABK69720.1 | ABK72597.1 | MSMEG_2906 | MSMEG_5215 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.743 |
| ABK69720.1 | ABK75024.1 | MSMEG_2906 | MSMEG_1566 | Conserved hypothetical protein. | Oxidoreductase; Identified by match to protein family HMM PF00296. | 0.583 |
| ABK69720.1 | cofD | MSMEG_2906 | MSMEG_1830 | Conserved hypothetical protein. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.713 |
| ABK69720.1 | fgd | MSMEG_2906 | MSMEG_0777 | Conserved hypothetical protein. | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | 0.788 |
| ABK71452.1 | ABK72130.1 | MSMEG_2904 | MSMEG_0339 | MmcI protein. | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | 0.667 |
| ABK71452.1 | ABK72517.1 | MSMEG_2904 | MSMEG_5920 | MmcI protein. | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | 0.653 |
| ABK71452.1 | ABK72597.1 | MSMEG_2904 | MSMEG_5215 | MmcI protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.741 |
| ABK71452.1 | ABK75024.1 | MSMEG_2904 | MSMEG_1566 | MmcI protein. | Oxidoreductase; Identified by match to protein family HMM PF00296. | 0.516 |
| ABK71452.1 | cofD | MSMEG_2904 | MSMEG_1830 | MmcI protein. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.691 |
| ABK71452.1 | fgd | MSMEG_2904 | MSMEG_0777 | MmcI protein. | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. Appears to have a role in resistance to oxidative stress, via its consumption of G6P that serves as a source of reducing power to combat oxidative stress in mycobacteria. Cannot use NAD, NADP, FAD or FMN instead of coenzyme F420 as an electron acceptor. Exhibits nearly no activity with D-mannose-6- phosphate or D-fructose-6-phosphate as substrate. Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family. | 0.782 |
| ABK72130.1 | ABK71452.1 | MSMEG_0339 | MSMEG_2904 | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | MmcI protein. | 0.667 |
| ABK72130.1 | ABK72597.1 | MSMEG_0339 | MSMEG_5215 | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.749 |
| ABK72130.1 | cofD | MSMEG_0339 | MSMEG_1830 | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.720 |
| ABK72517.1 | ABK69720.1 | MSMEG_5920 | MSMEG_2906 | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein. | 0.667 |
| ABK72517.1 | ABK71452.1 | MSMEG_5920 | MSMEG_2904 | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | MmcI protein. | 0.653 |
| ABK72517.1 | ABK72597.1 | MSMEG_5920 | MSMEG_5215 | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.743 |
| ABK72517.1 | cofD | MSMEG_5920 | MSMEG_1830 | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | Lppg:fo 2-phospho-l-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.719 |
| ABK72597.1 | ABK69720.1 | MSMEG_5215 | MSMEG_2906 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Conserved hypothetical protein. | 0.743 |
| ABK72597.1 | ABK71452.1 | MSMEG_5215 | MSMEG_2904 | Conserved hypothetical protein; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | MmcI protein. | 0.741 |
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