STRINGSTRING
ABK74848.1 ABK74848.1 ABK75195.1 ABK75195.1 ABK75538.1 ABK75538.1 ABK70090.1 ABK70090.1 ABK72055.1 ABK72055.1 ABK73101.1 ABK73101.1 ABK73191.1 ABK73191.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74848.1Identified by match to protein family HMM PF00903. (135 aa)    
Predicted Functional Partners:
ABK75195.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.610
ABK75538.1
TetR family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.556
ABK70090.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047.
 
     0.523
ABK72055.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.501
ABK73101.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07366.
  
    0.499
ABK73191.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047; match to protein family HMM PF01978.
 
    0.436
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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