STRINGSTRING
ABK74859.1 ABK74859.1 ABK72671.1 ABK72671.1 ABK74693.1 ABK74693.1 ABK74778.1 ABK74778.1 ABK74620.1 ABK74620.1 rseA rseA ABK73297.1 ABK73297.1 ABK70648.1 ABK70648.1 ABK71110.1 ABK71110.1 ABK70804.1 ABK70804.1 ABK73217.1 ABK73217.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74859.1Conserved hypothetical protein. (368 aa)    
Predicted Functional Partners:
ABK72671.1
Conserved hypothetical protein.
  
    0.773
ABK74693.1
Conserved hypothetical protein.
  
    0.773
ABK74778.1
Probable conserved transmembrane protein.
  
    0.771
ABK74620.1
Conserved hypothetical protein.
  
    0.771
rseA
Conserved hypothetical protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily.
  
    0.768
ABK73297.1
Conserved hypothetical protein.
  
    0.768
ABK70648.1
Heparin-binding hemagglutinin.
  
    0.766
ABK71110.1
Conserved hypothetical protein.
  
    0.765
ABK70804.1
Conserved hypothetical protein.
  
    0.763
ABK73217.1
Conserved hypothetical protein.
  
    0.763
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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