STRINGSTRING
ABK71682.1 ABK71682.1 ABK72478.1 ABK72478.1 ABK70486.1 ABK70486.1 ABK74871.1 ABK74871.1 ABK70012.1 ABK70012.1 ABK74223.1 ABK74223.1 ABK75221.1 ABK75221.1 ABK70443.1 ABK70443.1 ABK72420.1 ABK72420.1 ABK70752.1 ABK70752.1 ABK70424.1 ABK70424.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK71682.1Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (277 aa)    
Predicted Functional Partners:
ABK72478.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
 
0.865
ABK70486.1
RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
 
 0.814
ABK74871.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
 
 
 0.777
ABK70012.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106.
 
 
 0.773
ABK74223.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.768
ABK75221.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106.
 
 
 0.756
ABK70443.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
 
 
 0.748
ABK72420.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
 
 
 0.742
ABK70752.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
 
 
 0.736
ABK70424.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
 
 0.706
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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