STRINGSTRING
ABK70949.1 ABK70949.1 ABK72478.1 ABK72478.1 ABK70486.1 ABK70486.1 ABK70539.1 ABK70539.1 ABK74439.1 ABK74439.1 ABK72867.1 ABK72867.1 ABK71682.1 ABK71682.1 ABK73217.1 ABK73217.1 ABK71946.1 ABK71946.1 ABK74255.1 ABK74255.1 ABK75774.1 ABK75774.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70949.1Conserved hypothetical protein; Identified by match to protein family HMM PF01594. (395 aa)    
Predicted Functional Partners:
ABK72478.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
    0.796
ABK70486.1
RmlD substrate binding domain superfamily protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
  
 0.639
ABK70539.1
Conserved hypothetical protein.
 
    0.610
ABK74439.1
Conserved hypothetical protein.
  
    0.609
ABK72867.1
Conserved hypothetical proline rich protein.
 
    0.607
ABK71682.1
Short chain dehydrogenase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.605
ABK73217.1
Conserved hypothetical protein.
 
     0.599
ABK71946.1
Conserved hypothetical proline and threonine rich protein.
 
    0.597
ABK74255.1
Immunogenic protein MPT63.
  
     0.554
ABK75774.1
Conserved hypothetical proline rich protein.
 
     0.548
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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